Ahrenfeldt, J., Christensen, D. S., Østergaard, A. B.
, Kisistók, J., Sokač, M. & Birkbak, N. J. (2023).
The ratio of adaptive to innate immune cells differs between genders and associates with improved prognosis and response to immunotherapy.
PLOS ONE,
18(2 ), Article e0281375.
https://doi.org/10.1371/journal.pone.0281375
Kong, A., Thorleifsson, G., Frigge, M. L.
, Vilhjalmsson, B. J., Young, A. I., Thorgeirsson, T. E., Benonisdottir, S., Oddsson, A., Halldorsson, B. V., Masson, G., Gudbjartsson, D. F., Helgason, A., Bjornsdottir, G., Thorsteinsdottir, U. & Stefansson, K. (2018).
The nature of nurture: Effects of parental genotypes.
Science,
359(6374), 424-428.
https://doi.org/10.1126/science.aan6877
Skov, L., Coll Macià, M., Sveinbjörnsson, G., Mafessoni, F.
, Lucotte, E. A., Einarsdóttir, M. S., Jonsson, H., Halldorsson, B., Gudbjartsson, D. F., Helgason, A.
, Schierup, M. H. & Stefansson, K. (2020).
The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes.
Nature,
582(7810), 78-83.
https://doi.org/10.1038/s41586-020-2225-9
Bergeron, L. A.
, Besenbacher, S., Turner, T. N., Versoza, C. J., Wang, R. J., Price, A. L., Armstrong, E.
, Riera, M., Carlson, J., Chen, H. Y., Hahn, M. W., Harris, K.
, Kleppe, A. S., López-Nandam, E. H., Moorjani, P., Pfeifer, S. P., Tiley, G. P., Yoder, A. D., Zhang, G.
& Schierup, M. H. (2022).
The mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates.
eLife,
11, Article e73577.
https://doi.org/10.7554/eLife.73577
Murat, F., Mbengue, N.
, Winge, S. B., Trefzer, T., Leushkin, E., Sepp, M., Cardoso-Moreira, M., Schmidt, J., Schneider, C., Mößinger, K., Brüning, T., Lamanna, F.
, Riera Belles, M., Conrad, C., Kondova, I., Bontrop, R., Behr, R., Khaitovich, P., Pääbo, S. ... Kaessmann, H. (2023).
The molecular evolution of spermatogenesis across mammals.
Nature,
613(7943), 308-316.
https://doi.org/10.1038/s41586-022-05547-7
Stukenbrock, E. H., Bataillon, T., Dutheil, J. Y., Hansen, T. T., Li, R., Zala, M., McDonald, B. A.
, Wang, J. & Schierup, M. H. (2011).
The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species.
Genome Research,
21, 2157-2166.
https://doi.org/10.1101/gr.118851.110
Malolepszy, A., Mun, T., Sandal, N., Gupta, V., Dubin, M.
, Urbanski, D. F., Shah, N., Bachmann, A., Fukai, E., Hirakawa, H., Tabata, S.
, Nadzieja, M., Markmann, K., Su, J., Umehara, Y., Soyano, T., Miyahara, A., Sato, S., Hayashi, M.
... Andersen, S. U. (2016).
The LORE1 insertion mutant resource.
The Plant Journal,
88(2), 306-317.
https://doi.org/10.1111/tpj.13243
Montes, M.
, Nielsen, M. M., Maglieri, G., Jacobsen, A., Hojfeldt, J., Agrawal-Singh, S., Hansen, K., Helin, K., de Werken, H. J. G. V.
, Pedersen, J. S. & Lund, A. H. (2015).
The lncRNA MIR31HG regulates p16(INK4A) expression to modulate senescence.
Nature Communications,
6, Article 6967.
https://doi.org/10.1038/ncomms7967
Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R. ... Farh, K. K. H. (2023).
The landscape of tolerated genetic variation in humans and primates.
Science (New York, N.Y.),
380(6648), Article abn8197.
https://doi.org/10.1126/science.abn8197
Juul, R. I., Nielsen, M. M., Juul, M., Feuerbach, L.
& Pedersen, J. S. (2021).
The landscape and driver potential of site-specific hotspots across cancer genomes.
npj Genomic Medicine,
6(1), Article 33.
https://doi.org/10.1038/s41525-021-00197-6
Pedersen, C. B., Bybjerg-Grauholm, J.
, Pedersen, M. G., Grove, J., Agerbo, E., Bækvad-Hansen, M., Poulsen, J. B., Hansen, C. S.
, McGrath, J. J., Als, T. D., Goldstein, J. I., Neale, B. M., Daly, M. J., Hougaard, D. M.
, Mors, O., Nordentoft, M.
, Børglum, A. D., Werge, T.
& Mortensen, P. B. (2018).
The iPSYCH2012 case-cohort sample: new directions for unravelling genetic and environmental architectures of severe mental disorders.
Molecular Psychiatry,
23(1), 6–14.
https://doi.org/10.1038/mp.2017.196
Rafnar, T., Thorlacius, S., Steingrimsson, E.
, Schierup, M. H., Madsen, J. N., Calian, V., Eldon, B. J., Jonsson, T., Hein, J. & Thorgeirsson, S. S. (2004).
The Icelandic Cancer Project--a population-wide approach to studying cancer.
Nat Rev Cancer Jun,
4(6), 488-492.
Bergeron, L. A.
, Besenbacher, S., Bakker, J., Zheng, J., Li, P., Pacheco, G., Sinding, M. H. S., Kamilari, M., Gilbert, M. T. P.
, Schierup, M. H. & Zhang, G. (2021).
The germline mutational process in rhesus macaque and its implications for phylogenetic dating.
GigaScience,
10(5), Article giab029.
https://doi.org/10.1093/gigascience/giab029
Brown, P. E.
, Christensen, O. F., Clough, H. E., Diggle, P. J., Hart, C. A., Hazel, S., Kemp, R., Leatherbarrow, A. J. H., Moore, A., Sutherst, J., Turner, J., Williams, N. J., Wright, E. J. & French, N. P. (2004).
The frequency and spatial distribution of environmental campylobacter spp.
Applied Environmental Microbiology,
70, 6501-6511.
Fragata, I., Matuszewski, S., Schmitz, M. A.
, Bataillon, T., Jensen, J. D. & Bank, C. (2018).
The fitness landscape of the codon space across environments.
Heredity,
121(5), 422-437.
https://doi.org/10.1038/s41437-018-0125-7
Wigdor, E. M., Weiner, D. J.
, Grove, J., Fu, J. M.
, Thompson, W. K., Carey, C. E., Baya, N., van der Merwe, C., Walters, R. K., Satterstrom, F. K., Palmer, D. S., Rosengren, A., Bybjerg-Grauholm, J., Hougaard, D. M.
, Mortensen, P. B., Daly, M. J., Talkowski, M. E., Sanders, S. J., Bishop, S. L. ... iPSYCH Consortium (2022).
The female protective effect against autism spectrum disorder.
Cell Genomics,
2(6), Article 100134.
https://doi.org/10.1016/j.xgen.2022.100134
Frankell, A. M., Dietzen, M., Al Bakir, M., Lim, E. L., Karasaki, T., Ward, S., Veeriah, S., Colliver, E., Huebner, A., Bunkum, A., Hill, M. S., Grigoriadis, K., Moore, D. A., Black, J. R. M., Liu, W. K., Thol, K., Pich, O., Watkins, T. B. K., Naceur-Lombardelli, C. ... TRACERx Consortium (2023).
The evolution of lung cancer and impact of subclonal selection in TRACERx.
Nature,
616(7957), 525-533.
https://doi.org/10.1038/s41586-023-05783-5
Borisov, A. Y.
, Madsen, L. H., Tsyganov, V. E., Umehara, Y., Voroshilova, V. A., Batagov, A. O.
, Sandal, N. N., Mortensen, A.
, Schauser, L., Ellis, N., Tikhonovich, I. A.
& Stougaard, J. (2003).
The Sym35 gene required for root nodule development in Pisum sativum is an ortholog of Nin from Lotus japonicus.
Plant Physiology,
131, 1009-1017.
Aagaard, J., Foldager, L., Makki, A., Hansen, V. & Müller-Nielsen, K. (2017).
The efficacy of psychoeducation on recurrent depression: A randomised trial with a two-year follow-up.
Nordic Journal of Psychiatry,
71(3), 223-229.
https://doi.org/10.1080/08039488.2016.1266385
de Silva, E., Thorne, T., Ingram, P., Agrafioti, I., Swire, J.
, Wiuf, C. & Stumpf, MPH. (2006).
The effects of incomplete protein interaction data on structural and evolutionary inferences.
B M C Biology,
4(39).
https://doi.org/10.1186/1741-7007-4-39
Bolvig, A. K., Nørskov, N., Hedemann, M. S., Foldager, L., McCarthy-Sinclair, B., Marco, M.
, Lærke, H. N. & Knudsen, K. E. B. (2017).
The effect of antibiotics and diet on enterolactone concentration and metabolome studied by targeted and non-targeted LC-MS metabolomics.
Journal of Proteome Research,
16(6), 2135-2150.
https://doi.org/10.1021/acs.jproteome.6b00942
Bataillon, T., Mailund, T., Thorlacius, S., Steingrimsson, E., Rafnar, T., Halldorsson, M., Calian, V.
& Schierup, M. H. (2006).
The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers.
European Journal of Human Genetics,
14, 1044–1053.
https://doi.org/10.1038/sj.ejhg.5201669
Benito, B. M., Svenning, J.-C., Kellberg-Nielsen, T., Riede, F., Gil-Romera, G.
, Mailund, T., Kjaergaard, P. C.
& Sandel, B. S. (2017).
The ecological niche and distribution of Neanderthals during the Last Interglacial.
Journal of Biogeography,
44(1), 51–61.
https://doi.org/10.1111/jbi.12845
Bulik, C. M., Thornton, L. M., Parker, R., Kennedy, H., Baker, J. H., MacDermod, C., Guintivano, J., Cleland, L., Miller, A. L., Harper, L.
, Larsen, J. T., Yilmaz, Z., Grove, J., Sullivan, P. F.
, Petersen, L. V., Jordan, J., Kennedy, M. A. & Martin, N. G. (2021).
The Eating Disorders Genetics Initiative (EDGI): study protocol.
BMC Psychiatry,
21(1), Article 234.
https://doi.org/10.1186/s12888-021-03212-3
Borbye-Lorenzen, N.
, Zhu, Z., Agerbo, E., Albiñana, C., Benros, M. E., Bian, B.
, Børglum, A. D., Bulik, C. M.
, Debost, J.-C. P. G., Grove, J., Hougaard, D. M., McRae, A. F.
, Mors, O., Mortensen, P. B., Musliner, K. L., Nordentoft, M.
, Petersen, L. V., Privé, F., Sidorenko, J.
... McGrath, J. J. (2023).
The correlates of neonatal complement component 3 and 4 protein concentrations with a focus on psychiatric and autoimmune disorders.
Cell Genomics,
3(12), 100457. Article 100457.
https://doi.org/10.1016/j.xgen.2023.100457
Brodal, G. S., Fagerberg, R.
, Pedersen, C. N. S., Östlin, A., Orejas, F. (Ed.), Spirakis, P. G. (Ed.) & Leeuwen, J. V. (Ed.) (2001).
The Complexity of Constructing Evolutionary Trees Using Experiments. In
Lecture Notes In Computer Science; Vol. 2076: Proceedings of the 28th International Colloquium on Automata, Languages and Programming (2076 of Lecture Notes in Computer Science ed., Vol. 2076/2001, pp. 140-151). Springer.
Rogers, J., Raveendran, M., Alan Harris, R.
, Mailund, T., Leppälä, K., Athanasiadis, G., Schierup, M. H., Cheng, J., Munch, K., Walker, J. A., Konkel, M. K., Jordan, V., Steely, C. J., Beckstrom, T. O., Bergey, C., Burrell, A.
, Schrempf, D., Noll, A., Kothe, M. ... Baboon Genome Analysis Consortium (2019).
The comparative genomics and complex population history of Papio baboons.
Science Advances,
5(1), Article 6947.
https://doi.org/10.1126/sciadv.aau6947