Publications

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Wiuf, C. & Posada, D. (2003). A coalescent model of hotspot recombination. Genetics 164: 407-417. Genetics, 164, 407-417.

Forsberg, R. & Christiansen, F. B. (2003). A codon-based model of host-specific selection in parasites, with an application to the influenza A virus. Mol. Biol. Evol., 20(8), 1252-1259.

Fredslund, J., Hein, J. & Scharling, T. (2003). A large version of the small parsimony problem. In Proceedings of the 3rd workshop on algorithms in bioinformatics (WABI 2003) (pp. 417-432)

Eskildsen, S., Justesen, J., Schierup, M. H. & Hartmann, R. (2003). Characterization of the 2'-5'-oligoadenylate synthetase ubiquitin-like family. Nucleic Acids Research, 31(12), 3166-3173.

Eskildsen, S., Justesen, J., Schierup, M. H. & Hartmann, R. (2003). Characterization of the 2′-5′-oligoadenylate synthetase ubiquitin-like family. Nucl. Acids Res., 31, 3166-3173.

Brodal, G. S., Fagerberg, R. & Pedersen, C. N. S. (2003). Computing the Quartet Distance Between Evolutionary Trees in Time O(n log n). Algorithmica, 38(2), 377-395. https://doi.org/10.1007/s00453-003-1065-y

Fredslund, J. (2003). Den Hotteste Forskning.

Fredslund, J. & Hein, J. (2003). Determining the Optimal Set of Indels Explaining the Gaps in a Multiple Alignment Using Affine Gap Cost Function. Poster session presented at International Conference on Research in Computational Molecular Biology (RECOMB 2003), Berlin, Germany.

Willerslev, E., Hansen, AJ., Binladen, J., Brand, TB., Gilbert, MTP., Shapiro, B., Bunce, M., Wiuf, C., Gilichinsky, DA. & Cooper, A. (2003). Diverse plant and animal genetic records from holocene and pleistocene sediments. Kexue (Shanghai), 300, 791-795.

Charlesworth, D., Mable, B. K., Schierup, M. H., Bartolomé, C., Awadalla, P. & Schierup, M. H. (2003). Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata. Genetics, 164, 1519-1535.

Kristensen, L. M. & Mailund (2003). Efficient Path Finding with the Sweep-Line Method using External Storage. In Proceedings of International Conference on Formal Engineering Methods (ICFEM 2003) (pp. 319-337)

Mable, B. K., Schierup, M. H. & Charlesworth, D. (2003). Estimating the number, frequency, and dominance of S-alleles in a natural population of Arabidopsis lyrata (Brassicaceae) with sporophytic control of self-incompatibility. Iden, 90, 422-431. http://www.nature.com/hdy

Caprani, O., Fredslund, J., Jacobsen, J., Kramhøft, L., Lunding, R. B., Ilsø, J. M. & Wahlberg, M. (2003). Evolution of Computer Bugs – an Interdisciplinary Team Work. In K. H. Madsen & L. Qvortrup (Eds.), Behind the Scenes of Multimedia Production (pp. 186-215). Springer.

Charlesworth, D., Bartolomé, C., Schierup, M. H. & Mable, B. K. (2003). Haplotype structure of the stigmatic self-incompatibility gene in natural populations of Arabidopsis lyrata. Mol. Biol. Evol., 20(11), 1741-1753.

Wiuf, C. (2003). Inferring population history from geneaological trees. Journal of Mathematical Biology, 46, 241-264. https://doi.org/10.1007/s00285-002-0180-8

Christiansen, F. B. (2003). Lecture Notes in Population Genetics. Eget.

Glémin, S., Ronfort, J. & Bataillon, T. (2003). Patterns of inbreeding depression and architecture of the load in subdivided populations. Genetics, 165(4), 2193-212.

Villesen, P. & Boomsma, JJ. (2003). Patterns of male parentage in the fungus-growing ants. Behavioral Ecology and Sociobiology, 53(4), 246-253.

Schierup, M. H. & Forsberg, R. (2003). Recombination and phylogenetic analysis of HIV-1. Paper presented at Atti dei Convegni Lincei - Tavola rotonda nell'ambito della Conferenza annuale della Ricerca, Roma 28-29 settember, 2001.

Richman, A. D., Herrera, L. G., Nash, D. & Schierup, M. H. (2003). Relative roles of mutation and recombination in generating allelic polymorphism at an MHC class II locus in Peromyscus maniculatus. Genetetical Research, Camb, 82, 89-99.

Posada, D. & Wiuf, C. (2003). Simulating haplotype blocks in the human genome. Bioinformatics, 19(2), 289-290.

Wiuf, C., Laidlaw, Z. & Stumpf, MPH. (2003). Some notes on the combinatorial properties of haplotype tagging. Math. Biosci., 185, 205-216.

Brodal, G. S., Fagerberg, R., Mailund, T., Pedersen, C. N. S. & Phillips, D. (2003). Speeding Up Neighbour-Joining Tree Construction.

Wiuf, C. (2003). The age of a rare mutation. In PJ. Green, NL. Hjort & S. Richardson (Eds.), Highly Structured Stochastic Systems (Vol. 27, pp. 417-422). Oxford University Press.

Borisov, A. Y., Madsen, L. H., Tsyganov, V. E., Umehara, Y., Voroshilova, V. A., Batagov, A. O., Sandal, N. N., Mortensen, A., Schauser, L., Ellis, N., Tikhonovich, I. A. & Stougaard, J. (2003). The Sym35 gene required for root nodule development in Pisum sativum is an ortholog of Nin from Lotus japonicus. Plant Physiology, 131, 1009-1017.

Mailund & Kristensen, L. M. (2002). A Compositional Sweep-Line State Space Exploration Method. In Proceedings of Formal Description Techniques for Distributed Systems and Communication Protocols (FORTE 2002) (pp. 327-343)

Fredslund, J. & Matarić, M. J. (2002). A General Algorithm for Robot Formations Using Local Sensing and Minimal Communication. Transactions on Robotics and Automation, Special Issue on Multi Robot Systems, 18(5), 837-846.

Mailund & Kristensen, L. M. (2002). A Generalised Sweep-Line Method for Safety Properties. In Proceedings of Formal Methods Europe (FME 2002) (pp. 549-567)

Christiansen, F. B., Pedersen, C. N. S., Schauser, L. & Schierup, M. H. (2002). Bioinformatik ved Aarhus Universitet: Etablering af Center for Bioinformatik og en 2-årig kandidatuddannelse. Biozoom, 5(3), 12-16.

Schultz, T. R., Solomon, S. A., Mueller, U. G., Villesen, P., Boomsma, JJ., Adams, R. M. M. & Norden, B. (2002). Cryptic speciation in the fungus-growing ant Cyphomyrmex longiscapus Weber and Cyphomyrmex muelleri Schultz and Solomon, new species (Formicidae, Attini). Insectes Sociaux, 49, 331-343.

Jacobsen, I. S., Boesen, T., Mygind, T., Melkova, R., Birkelund, S., Christiansen, G. & Schierup, M. H. (2002). Determination of recombination in Mycoplasma hominis. Infect Genet Evol, 1, 277-85.

Thuillet, A.-C., Bru, D., David, J., Roumet, P., Santoni, S., Sourdille, P. & Bataillon, T. (2002). Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf. Molecular Biology and Evolution, 19(1), 122-5.

Fredslund, J. & Matarić, M. J. (2002). Huey, Dewey, Louie, and GUI – Commanding Robot Formations. In Proceedings of the 2002 IEEE International Conference on Robotics and Automation (ICRA'02) IEEE.

Villesen, P., Murakami, T., Schultz, T. R. & Boomsma, J. J. (2002). Identifying the transition between single and multiple mating of queens in fungus-growing ants. Proceedings of the Royal Society B: Biological Sciences, 269(1500), 1541-1548.

Villesen, P., Gertsch, P. J. & Boomsma, JJ. (2002). Microsatellite primers for fungus-growing ants. Molecular Ecology Resources, 2(3), 320-322.

Wiuf, C. (2002). On the minimum number of topologies explaining a sample of DNA sequences. Theor Pop Biol, 62, 357-363.

Boesen, I. Z., Søgaard, T., Mygind, T., Melkova, R., Birkelund, S., Schierup, M. H. & Christiansen, G. (2002). Recombination in Mycoplasma hominis. Infection, Genetics and Evolution, 1, 277-285. http://www.elsevier.com/locate/meegid

Hein, J., Pedersen, C. N. S. & Jensen, J. L. (2002). Recursions for Statistical Multiple Alignment. Proceedings of the National Academy of Sciences (PNAS), 100(25), 14960-14965.

Hein, J. & Wiuf, C. (2002). Review of GR Grant and WJ Ewens, `Statistical Methods in Bioinformatics: An Introduction' In Briefings in Bioinformatics (Vol. 3, pp. 318-319). Springer.

Fredslund, J. & Matarić, M. J. (2002). Robots in Formation Using Local Information. In Proceedings of the 7th International Conference on Intelligent Autonomous Systems (IAS-7)

Christensen, S., Schöller, S., Schierup, M. H., Vestergaard, B. F. & Mordhorst, C. H. (2002). Sequence analysis of measles virus strains collected during the pre- and early-vaccination era in Denmark reveals a considerable diversity of ancient strains. Acta Pathologica Microbiologica et Immunologica Scandinavica, 110, 113-122.

Brodal, G. S., Lyngsø, R. B., Östlin, A. & Pedersen, C. N. S. (2002). Solving the String Statistics Problem in Time O(n log n). In P. Widmayer, S. Eidenbenz, F. Triguero, R. Morales, R. Conejo & M. Hennessy (Eds.), Automata, Languages and Programming: 29th International Colloquium, ICALP 2002 Málaga, Spain, July 8–13, 2002 Proceedings (pp. 728-739). Springer. https://doi.org/10.1007/3-540-45465-9_62

Braïda, B., Thøgersen, L., Wu, W. & Hiberty, P. C. (2002). Stability, Metastability, and Unstability of Three-Electron-Bonded Radical Anions. A Model ab Initio Theoretical Study. Journal of the American Chemical Society, 124, 11781-11790.

Gallasch, G. E., Kristensen, L. M. & Mailund (2002). Sweep-Line State Space Exploration for Coloured Petri Nets. In Proceedings of Fourth Workshop on Practical Use of Coloured Petri Nets and the CPN Tools (CPN 2002) (pp. 101-119)

Wiuf, C., Christensen, T. & Hein, J. (2001). A simulation study of the reliability of recombination detection methods. Mol. Biol. Evol., 18, 1929-1939.

Christensen, S., Kristensen, L. M. & Mailund (2001). A Sweep-Line Method for State Space Exploration. In Proceedings of Tools and Algorithms for the Construction and Analysis of Systems (TACAS 2001) (pp. 450-464)

Christensen, S., Kristensen, L. M. & Mailund (2001). Condensed State Spaces for Timed Petri Nets. In Proceedings of International Conference on Application and Theory of Petri Nets (ICATPN 2001) (pp. 101-120)

Wiuf, C. (2001). Do ΔF508 heterozygotes have a selective advantage? Genet Res, 78, 41-47. https://doi.org/10.1017/S0016672301005195

Fredslund, J. & Matarić, M. J. (2001). Robot Formations Using Only Local Sensing and Control. In Proceedings of the IEEE International Symposium on Computational Intelligence in Robotics and Automation (CIRA-01)

Cañamero, L. D. & Fredslund, J. (2001). How Does It Feel? Emotional Interaction with a Humanoid LEGO Robot. In K. Dautenhahn (Ed.), Socially Intelligent Agents: The Human in the Loop. Papers from the AAAI 2000 Fall Symposium in Cape Cod, Massachusetts, USA (pp. 23-28). AAAI Press.

Displaying results 1201 to 1250 out of 1352

Revised 21.08.2024

Palle Villesen