Chatwin, H., Holde, K., Yilmaz, Z., Larsen, J. T., Albiñana, C., Vilhjálmsson, B. J., Mortensen, P. B., Thornton, L. M., Bulik, C. M.
& Petersen, L. V. (2023).
Risk factors for anorexia nervosa: A population-based investigation of sex differences in polygenic risk and early life exposures.
International Journal of Eating Disorders,
56(9), 1703-1716.
https://doi.org/10.1002/eat.23997
Poulsgaard, G. A., Sørensen, S. G., Juul, R. I., Nielsen, M. M. & Pedersen, J. S. (2023).
Sequence dependencies and mutation rates of localized mutational processes in cancer.
Genome Medicine,
15(1), Article 63.
https://doi.org/10.1186/s13073-023-01217-z
Sokač, M., Kjær, A., Dyrskjøt, L., Haibe-Kains, B., Jwl Aerts, H.
& Birkbak, N. J. (2023).
Spatial transformation of multi-omics data unlocks novel insights into cancer biology.
eLife,
12, Article RP87133.
https://doi.org/10.7554/eLife.87133
Winters, J. F. M., Kobek-Kjeldager, C., Foldager, L., Tecles, F.
& Pedersen, L. J. (2023).
Stress responses in pigs postweaning: Effect of heavier hybrid and weaning intact litters.
Applied Animal Behaviour Science,
269, Article 106106.
https://doi.org/10.1016/j.applanim.2023.106106
Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R. ... Farh, K. K. H. (2023).
The landscape of tolerated genetic variation in humans and primates.
Science (New York, N.Y.),
380(6648), Article abn8197.
https://doi.org/10.1126/science.abn8197
Ahrenfeldt, J., Christensen, D. S., Østergaard, A. B.
, Kisistók, J., Sokač, M. & Birkbak, N. J. (2023).
The ratio of adaptive to innate immune cells differs between genders and associates with improved prognosis and response to immunotherapy.
PLOS ONE,
18(2 ), Article e0281375.
https://doi.org/10.1371/journal.pone.0281375
Abbosh, C., Frankell, A. M., Harrison, T.
, Kisistok, J., Garnett, A., Johnson, L., Veeriah, S., Moreau, M., Chesh, A., Chaunzwa, T. L., Weiss, J., Schroeder, M. R., Ward, S., Grigoriadis, K., Shahpurwalla, A., Litchfield, K., Puttick, C., Biswas, D., Karasaki, T. ... TRACERx Consortium (2023).
Tracking early lung cancer metastatic dissemination in TRACERx using ctDNA.
Nature,
616(7957), 553-562.
https://doi.org/10.1038/s41586-023-05776-4
Bergman, J., Pedersen, R., Lundgren, E. J., Lemoine, R. T., Monsarrat, S., Pearce, E. A., Schierup, M. H. & Svenning, J. C. (2023).
Worldwide Late Pleistocene and Early Holocene population declines in extant megafauna are associated with Homo sapiens expansion rather than climate change.
Nature Communications,
14(1), Article 7679.
https://doi.org/10.1038/s41467-023-43426-5
Pedersen, E. M., Agerbo, E., Plana-Ripoll, O., Grove, J., Dreier, J. W., Musliner, K. L., Bækvad-Hansen, M., Athanasiadis, G., Schork, A., Bybjerg-Grauholm, J., Hougaard, D. M., Werge, T., Nordentoft, M.
, Mors, O., Dalsgaard, S., Christensen, J., Børglum, A. D., Mortensen, P. B., McGrath, J. J. ... Vilhjálmsson, B. J. (2022).
Accounting for age of onset and family history improves power in genome-wide association studies.
American Journal of Human Genetics,
109(3), 417-432.
https://doi.org/10.1016/j.ajhg.2022.01.009
Antaki, D., Guevara, J., Maihofer, A. X., Klein, M., Gujral, M.
, Grove, J., Carey, C. E., Hong, O., Arranz, M. J., Hervas, A., Corsello, C., Vaux, K. K., Muotri, A. R., Iakoucheva, L. M., Courchesne, E., Pierce, K., Gleeson, J. G., Robinson, E. B., Nievergelt, C. M. & Sebat, J. (2022).
A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex.
Nature Genetics,
54(9), 1284-1292.
https://doi.org/10.1038/s41588-022-01064-5
Wang, T., Nielsen, K. L., Frisch, K., Lassen, J. K., Nielsen, C. B., Andersen, C. U., Villesen, P., Andreasen, M. F., Hasselstrøm, J. B. & Johannsen, M. (2022).
A Retrospective Metabolomics Analysis of Gamma-Hydroxybutyrate in Humans: New Potential Markers and Changes in Metabolism Related to GHB Consumption.
Frontiers in Pharmacology,
13, Article 816376.
https://doi.org/10.3389/fphar.2022.816376
Yengo, L., Vedantam, S., Marouli, E., Sidorenko, J., Bartell, E., Sakaue, S., Graff, M., Eliasen, A. U., Jiang, Y., Raghavan, S., Miao, J., Arias, J. D., Graham, S. E., Mukamel, R. E., Spracklen, C. N., Yin, X., Chen, S-H., Ferreira, T., Highland, H. H. ... Understanding Society Scientific Group (2022).
A saturated map of common genetic variants associated with human height.
Nature,
610(7933), 704–712.
https://doi.org/10.1038/s41586-022-05275-y
Wurtz, K. E., Tahamtani, F. M.
, Foldager, L., Thodberg, K. & Riber, A. B. (2022).
Association of range use, individual behavior, and welfare indicators of two laying hen hybrids housed under organic conditions. In M. Kjosevski, S. Waiblinger & V. Ilieski (Eds.),
Proceedings of the 55th Congress of the ISAE: Animal Behaviour and Beyond (pp. 56-56).
https://www.applied-ethology.org/res/ISAE_2022_PROCEEDINGS_e-version.pdf
Franceschini, S., Grelet, C., Leblois, J., Gengler, N., Soyeurt, H. & GplusE Consortium (2022).
Can unsupervised learning methods applied to milk recording big data provide new insights into dairy cow health? Journal of Dairy Science,
105(8), 6760-6772.
https://doi.org/10.3168/jds.2022-21975
Sokac, M., Ahrenfeldt, J., Litchfield, K., Watkins, T. B. K.
, Knudsen, M., Dyrskjøt, L., Jakobsen, M. R. & Birkbak, N. J. (2022).
Classifying cGAS-STING Activity Links Chromosomal Instability with Immunotherapy Response in Metastatic Bladder Cancer.
Cancer Research Communications,
2(8), 762-771.
https://doi.org/10.1158/2767-9764.CRC-22-0047
Wurtz, K. E., Thodberg, K., Berenjian, A.
, Foldager, L., Tahamtani, F. M. & Riber, A. B. (2022).
Commercial layer hybrids kept under organic conditions: a comparison of range use, welfare, and egg production in two layer strains.
Poultry Science,
101(9), Article 102005.
https://doi.org/10.1016/j.psj.2022.102005
Guillemet, M., Chabas, H., Nicot, A., Gatchich, F., Ortega-Abboud, E., Buus, C.
, Hindhede, L., Rousseau, G. M.
, Bataillon, T., Moineau, S. & Gandon, S. (2022).
Competition and coevolution drive the evolution and the diversification of CRISPR immunity.
Nature Ecology and Evolution,
6(10), 1480-1488.
https://doi.org/10.1038/s41559-022-01841-9
Ahrenfeldt, J., Christensen, D. S., Sokač, M., Kisistók, J., McGranahan, N.
& Birkbak, N. J. (2022).
Computational Analysis Reveals the Temporal Acquisition of Pathway Alterations during the Evolution of Cancer.
Cancers,
14(23), Article 5817.
https://doi.org/10.3390/cancers14235817
Kongsted, H., Krogh, M. A., Nielsen, C. L., Henriksen, B. I. F., Foldager, L. & Sørensen, J. T. (2022).
Danish welfare-label pig production systems: Usage of antibiotics and occurrence of disease. 83-91. Paper presented at 20th Congress of the International Society for Animal Hygiene , Berlin, Germany.
Foldager, L., Kaiser, M. Ø., Chen, G., Jensen, L. D., Kristensen, J. K., Kobek-Kjeldager, C., Thodberg, K., Rong, L. & Herskin, M. S. (2022).
Deck height during transport of weaners – piglet height and microclimatic conditions inside trucks. 129-142. Abstract from Symposium i Anvendt Statistik 2022, København, Denmark.
Foldager, L., Kaiser, M., Chen, G., Jensen, L. D., Kristensen, J. K., Kobek-Kjeldager, C., Thodberg, K., Rong, L. & Herskin, M. S. (2022).
Deck height during transport of weaners – piglet height and microclimatic conditions inside trucks. In
Book of Abstracts of the 73rd Annual Meeting of the European Federation of Animal Science (pp. 181-181). Wageningen Academic Publishers.
https://doi.org/10.3920/978-90-8686-937-4
Foldager, L., Kaiser, M. Ø., Chen, G., Jensen, L. D., Kristensen, J. K., Kobek-Kjeldager, C., Thodberg, K., Rong, L. & Herskin, M. S. (2022).
Deck height during transport of weaners – piglet height and microclimatic conditions inside trucks. In P. Linde (Ed.),
Symposium i anvendt statistik (pp. 129-142). SEGES Innovation.
http://www.statistiksymposium.dk/Symposium%202022_Web.pdf
Lucotte, E. A., Albiñana, C., Laurent, R., Bhérer, C.
, Bataillon, T., Toupance, B. & Genome of the Netherland Consortium (2022).
Detection of sexually antagonistic transmission distortions in trio datasets.
Evolution Letters,
6(2), 203-216.
https://doi.org/10.1002/evl3.271
Albiñana, C., Boelt, S. G., Cohen, A. S.
, Zhu, Z., Musliner, K. L., Vilhjálmsson, B. J. & McGrath, J. J. (2022).
Developmental exposure to vitamin D deficiency and subsequent risk of schizophrenia.
Schizophrenia Research,
247, 26-32.
https://doi.org/10.1016/j.schres.2021.06.004
Rajagopal, V. M., Duan, J., Vilar-Ribó, L., Grove, J., Zayats, T., Ramos-Quiroga, J. A., Satterstrom, F. K., Artigas, M. S., Bybjerg-Grauholm, J., Bækvad-Hansen, M.
, Als, T. D., Rosengren, A., Daly, M. J., Neale, B. M., Nordentoft, M., Werge, T.
, Mors, O., Hougaard, D. M.
, Mortensen, P. B. ... Demontis, D. (2022).
Differences in the genetic architecture of common and rare variants in childhood, persistent and late-diagnosed attention-deficit hyperactivity disorder.
Nature Genetics,
54(8), 1117-1124.
https://doi.org/10.1038/s41588-022-01143-7
Amorim Franchi, G., Larsen, M. L. V., Herskin, M. S., Foldager, L., Larsen, M. & Jensen, M. B. (2022).
Effects of changes in diet energy density and milking frequency and a single injection of cabergoline at dry-off on feeding behavior and rumination time in dairy cows.
JDS Communications ,
3(3), 195-200.
https://doi.org/10.3168/jdsc.2021-0162
Amorim Franchi, G., Jensen, M. B., Foldager, L., Larsen, M. & Herskin, M. S. (2022).
Effects of dietary and milking frequency changes and administration of cabergoline on clinical udder characteristics in dairy cows during dry-off.
Research in Veterinary Science,
143, 88-98.
https://doi.org/10.1016/j.rvsc.2021.12.019
Hansen, N. P., Kristensen, T., Johansen, M., Wiking, L., Poulsen, N. A., Hellwing, A. L. F., Foldager, L., Jensen, S. K., Larsen, L. B. & Weisbjerg, M. R. (2022).
Effects on feed intake, milk production, and methane emission in dairy cows fed silage or fresh grass with concentrate or fresh grass harvested at early or late maturity stage without concentrate.
Journal of Dairy Science,
105(10), 8036-8053.
https://doi.org/10.3168/jds.2022-21885
Bataillon, T., Gauthier, P.
, Villesen, P., Santoni, S., Thompson, J. D.
& Ehlers, B. K. (2022).
From genotype to phenotype: Genetic redundancy and the maintenance of an adaptive polymorphism in the context of high gene flow.
Evolution Letters,
6(2), 189-202.
https://doi.org/10.1002/evl3.277
Grotzinger, A. D., Mallard, T. T., Akingbuwa, W. A., Ip, H. F., Adams, M. J., Lewis, C. M., McIntosh, A. M.
, Grove, J., Dalsgaard, S., Lesch, K. P., Strom, N.
, Meier, S. M., Mattheisen, M., Børglum, A. D., Mors, O., Breen, G., iPSYCH, Tourette Syndrome and Obsessive Compulsive Disorder Working Group of the Psychiatric Genetics Consortium, Bipolar Disorder Working Group of the Psychiatric Genetics Consortium ... Nivard, M. G. (2022).
Genetic architecture of 11 major psychiatric disorders at biobehavioral, functional genomic and molecular genetic levels of analysis.
Nature Genetics,
54(5), 548-559.
https://doi.org/10.1038/s41588-022-01057-4
Skotte, L., Fadista, J., Bybjerg-Grauholm, J., Appadurai, V., Hildebrand, M. S., Hansen, T. F., Banasik, K.
, Grove, J., Albiñana, C., Geller, F., Bjurström, C. F.
, Vilhjálmsson, B. J., Coleman, M., Damiano, J. A., Burgess, R., Scheffer, I. E., Pedersen, O. B. V.
, Erikstrup, C., Westergaard, D. ... Feenstra, B. (2022).
Genome-wide association study of febrile seizures implicates fever response and neuronal excitability genes.
Brain : a journal of neurology,
145(2), 555–568.
https://doi.org/10.1093/brain/awab260
Soraggi, S., Rhodes, J., Altinkaya, I., Tarrant, O., Balloux, F., Fisher, M. C. & Fumagalli, M. (2022).
HMMploidy: inference of ploidy levels from short-read sequencing data .
Peer Community Journal,
2, Article e60.
https://doi.org/10.24072/pcjournal.178
Mattheisen, M., Grove, J., Als, T. D., Martin, J., Voloudakis, G.
, Meier, S., Demontis, D., Bendl, J., Walters, R., Carey, C. E., Rosengren, A.
, Strom, N. I., Hauberg, M. E., Zeng, B., Hoffman, G., Zhang, W., Bybjerg-Grauholm, J., Bækvad-Hansen, M.
, Agerbo, E. ... Børglum, A. D. (2022).
Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups.
Nature Genetics,
54(10), 1470-1478.
https://doi.org/10.1038/s41588-022-01171-3