Brodal, G. S., Fagerberg, R.
, Mailund, T., Pedersen, C. N. S. & Sand, A. (2013).
Efficient Algorithms for Computing the Triplet and Quartet Distance Between Trees of Arbitrary Degree.
The Annual A C M - S I A M Symposium on Discrete Algorithms. Proceedings,
24, 1814-1832.
http://knowledgecenter.siam.org/0236-000098/0236-000098/1
Hansen, N. P., Kristensen, T., Johansen, M., Wiking, L., Poulsen, N. A., Hellwing, A. L. F., Foldager, L., Jensen, S. K., Larsen, L. B. & Weisbjerg, M. R. (2022).
Effects on feed intake, milk production, and methane emission in dairy cows fed silage or fresh grass with concentrate or fresh grass harvested at early or late maturity stage without concentrate.
Journal of Dairy Science,
105(10), 8036-8053.
https://doi.org/10.3168/jds.2022-21885
Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Thodberg, K., Petersen, D. L. S.
& Herskin, M. S. (2023).
Effects of journey duration and temperature during pre-slaughter transport on behaviour of cull sows in lairage.
Research in Veterinary Science,
164, Article 105016.
https://doi.org/10.1016/j.rvsc.2023.105016
Larsen, M., Amorim Franchi, G., Herskin, M. S., Foldager, L., Larsen, M. L. V., Hernandez Castellano, L. E., Sørensen, M. T. & Jensen, M. B. (2021).
Effects of feeding level, milking frequency, and single injection of cabergoline on feed intake, milk yield, milk leakage, and clinical udder characteristics during dry-off in dairy cows.
Journal of Dairy Science,
104(10), 11108-11125. Article 20289.
https://doi.org/10.3168/jds.2021-20289
Hernández-Castellano, L. E., Sørensen, M. T., Foldager, L., Herskin, M. S., Gross, J. J., Bruckmaier, R. M.
& Larsen, M. (2023).
Effects of feeding level, milking frequency, and single injection of cabergoline on blood metabolites, hormones, and minerals around dry-off in dairy cows.
Journal of Dairy Science,
106(4), 2919-2932.
https://doi.org/10.3168/jds.2022-22648
Jensen, M. B., Franchi, G. A., Larsen, M., Foldager, L. & Herskin, M. S. (2023).
Effects of feed energy density, daily milking frequency, and a single injection of cabergoline on behavior and welfare in dairy cows at dry-off.
Journal of Dairy Science,
106(12), 9136-9149.
https://doi.org/10.3168/jds.2022-22835
Amorim Franchi, G., Jensen, M. B., Foldager, L., Larsen, M. & Herskin, M. S. (2022).
Effects of dietary and milking frequency changes and administration of cabergoline on clinical udder characteristics in dairy cows during dry-off.
Research in Veterinary Science,
143, 88-98.
https://doi.org/10.1016/j.rvsc.2021.12.019
Foldager, L., Thodberg, K., Chen, G., Kristensen, J. K., Jensen, L. D., Kaiser, M., Kobek-Kjeldager, C., Rong, L. & Herskin, M. S. (2024).
Effects of deck height during transport of weaners: in-vehicle conditions and clinical indicators. In
Book of Abstracts of the 75th Annual Meeting of the European Federation of Animal Science (pp. 487-487). Article Session 38, Poster 12 Wageningen Academic Publishers.
Amorim Franchi, G., Larsen, M. L. V., Herskin, M. S., Foldager, L., Larsen, M. & Jensen, M. B. (2022).
Effects of changes in diet energy density and milking frequency and a single injection of cabergoline at dry-off on feeding behavior and rumination time in dairy cows.
JDS Communications ,
3(3), 195-200.
https://doi.org/10.3168/jdsc.2021-0162
Cheng, Z., Wylie, A., Ferris, C.
, Ingvartsen, K. L., Wathes, D. C. & GplusE Consortium (2021).
Effect of diet and nonesterified fatty acid levels on global transcriptomic profiles in circulating peripheral blood mononuclear cells in early lactation dairy cows.
Journal of Dairy Science,
104(9), 10059-10075.
https://doi.org/10.3168/jds.2021-20136
Duan, H., Mansour, S., Reed, R., Gillis, M. K., Parent, B., Liu, B., Sztupinszki, Z.
, Birkbak, N., Szallasi, Z., Elia, A. E. H., Garber, J. E. & Pathania, S. (2020).
E3 ligase RFWD3 is a novel modulator of stalled fork stability in BRCA2-deficient cells.
The Journal of Cell Biology,
219(6), Article e201908192.
https://doi.org/10.1083/jcb.201908192
Lucotte, E. A., Skov, L., Jensen, J. M., Coll Macià, M., Munch, K. & Schierup, M. H. (2018).
Dynamic Copy Number Evolution of X- and Y-Linked Ampliconic Genes in Human Populations.
Genetics,
209(3), 907-920.
https://doi.org/10.1534/genetics.118.300826
Ørnbjerg, L. M., Brahe, C. H., Linde, L., Jacobsson, L., Nissen, M. J., Kristianslund, E. K., Santos, M. J., Nordström, D., Rotar, Z., Gudbjornsson, B., Onen, F., Codreanu, C., Lindström, U., Möller, B., Kvien, T. K., Barcelos, A., Eklund, K. K., Tomšič, M., Love, T. J. ... Hetland, M. L. (2024).
Drug effectiveness of 2nd and 3rd TNF inhibitors in psoriatic arthritis – relationship with the reason for withdrawal from the previous treatment.
Joint Bone Spine,
91(4), Article 105729.
https://doi.org/10.1016/j.jbspin.2024.105729
Christensen, M. H., Drue, S. O., Rasmussen, M. H., Frydendahl, A., Lyskjær, I., Demuth, C., Nors, J., Gotschalck, K. A., Iversen, L. H., Andersen, C. L. & Pedersen, J. S. (2023).
Dreams: deep read-level error model for sequencing data applied to low-frequency variant calling and circulating tumor DNA detection.
Genome Biology,
24(1), 99. Article 99.
https://doi.org/10.1186/s13059-023-02920-1
Ernst, E. H., Grøndahl, M. L., Grund, S., Hardy, K.
, Heuck, A., Sunde, L., Franks, S., Andersen, C. Y.
, Villesen, P. & Lykke-Hartmann, K. (2017).
Dormancy and activation of human oocytes from primordial and primary follicles: molecular clues to oocyte regulation.
Human Reproduction,
32(8), 1684-1700.
https://doi.org/10.1093/humrep/dex238
Giagnoni, G., Foldager, L., Stephansen, R. B., Liu, H., Lassen, J.
& Weisbjerg, M. R. (2025).
Do feed conversion efficiency and its inverse, feed conversion ratio, differ in their distributions for dairy cows?. 200. Abstract from 76th Annual Meeting of The European Federation of Animal Science, Innsbruck, Austria.
Schild, S.-L. A., Foldager, L., Bonde, M.
, Andersen, H. M.-L. & Pedersen, L. J. (2019).
Does hut climate matter for piglet survival in organic production? Animal,
13(4), 826-834.
https://doi.org/10.1017/S175173111800201X
Starnawska, A., Bukowski, L., Chernomorchenko, A., Elfving, B., Müller, H. K., van den Oord, E., Aberg, K., Guintivano, J.
, Grove, J., Mors, O., Børglum, A. D., Nielsen, A. L., Qvist, P. & Staunstrup, N. H. (2021).
DNA methylation of the KLK8 gene in depression symptomatology.
Clinical Epigenetics,
13(1), Article 200.
https://doi.org/10.1186/s13148-021-01184-5
Gao, F., Li, S., Lin, L., Li, J., Luo, Y., Zhang, X.
, Nielsen, A. L. & Bolund, L. (2011).
DNA methylation in peripheral blood cells of pigs cloned by somatic cell nuclear transfer.
Cellular Reprogramming,
13(4), 307-14.
https://doi.org/10.1089/cell.2010.0099,
https://doi.org/10.1089/cell.2010.0099
Skakkebæk, A., Nielsen, M. M., Trolle, C., Vang, S., Hornshøj, H., Hedegaard, J., Wallentin, M., Bojesen, A., Hertz, J. M., Fedder, J., Østergaard, J. R., Pedersen, J. S. & Gravholt, C. H. (2018).
DNA hypermethylation and differential gene expression associated with Klinefelter syndrome.
Scientific Reports,
8(1), Article 13740.
https://doi.org/10.1038/s41598-018-31780-0
Li, J., Wang, K., Li, S., Timmermans-Wielenga, V., Rank, F.
, Wiuf, C., Zhang, X., Yang, H.
& Bolund, L. (2009).
DNA copy number aberrations in breast cancer by array comparative genomic hybridization.
Genomics Proteomics & Bioinformatics,
7(1-2), 13-24.
https://doi.org/10.1016/S1672-0229(08)60029-7
Charlesworth, D., Mable, B. K., Schierup, M. H., Bartolomé, C., Awadalla, P.
& Schierup, M. H. (2003).
Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata.
Genetics,
164, 1519-1535.
Willerslev, E., Hansen, AJ., Binladen, J., Brand, TB., Gilbert, MTP., Shapiro, B., Bunce, M.
, Wiuf, C., Gilichinsky, DA. & Cooper, A. (2003).
Diverse plant and animal genetic records from holocene and pleistocene sediments. Kexue (Shanghai),
300, 791-795.
Kirkegaard, K. K., Fredsted, P. V., Jensen, J. M., Hindkjær, J. J., Kølvraa, S.
, Ingerslev, H. J. & Lykke-Hartmann, K. (2015).
Distinct differences in global gene expression profiles in non-implanted blastocysts and blastocysts resulting in live birth.
Gene,
571(2), 212-220.
https://doi.org/10.1016/j.gene.2015.06.057
Høgslund, N., Radutoiu, S., Krusell, L., Voroshilova, V., Hannah, M. A., Goffard, N., Sanchez, D. H., Lippold, F., Ott, T., Sato, S., Tabata, S.
, Liboriussen, P., Lohmann, G. V., Schauser, L., Weiller, G. F., Udvardi, M. K.
& Stougaard, J. (2009).
Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants.
PLoS One,
4(8), e6556.
https://doi.org/10.1371/journal.pone.0006556
Verhoef, E.
, Demontis, D., Burgess, S., Shapland, C. Y., Dale, P. S., Okbay, A., Neale, B. M., Faraone, S. V., iPSYCH-Broad-PGC ADHD Consortium
& Dalsgaard, S. (2019).
Disentangling polygenic associations between attention-deficit/hyperactivity disorder, educational attainment, literacy and language.
Translational Psychiatry,
9(1), Article 35.
https://doi.org/10.1038/s41398-018-0324-2
Brodersen, D. E., Bendtsen, K. L., Xu, K., Luckmann, M., Winther, K., Shah, S. A.
& Pedersen, C. N. S. (2017).
Discrete Structural Dynamics of Pseudo-Palindromic Motifs Control DNA Binding of Bacterial Toxin-Antitoxin Complexes.
The FASEB Journal,
31(No. 1 supplement), Article 777.2.
http://www.fasebj.org/doi/abs/10.1096/fasebj.31.1_supplement.777.2
Demontis, D., Walters, R. K., Martin, J.
, Mattheisen, M., Als, T. D., Agerbo, E., Baldursson, G., Belliveau, R., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Cerrato, F., Chambert, K., Churchhouse, C., Dumont, A., Eriksson, N., Gandal, M., Goldstein, J. I., Grasby, K. L.
, Grove, J. ... Børglum, A. D. (2019).
Discovery of the first genome-wide significant risk loci for attention deficit/hyperactivity disorder.
Nature Genetics,
51(1), 63–75.
https://doi.org/10.1038/s41588-018-0269-7
Liu, S., Huang, S., Rao, J., Ye, W., Genome Denmark Consortium (Anders Børglum, member of -), Krogh, A.
& Wang, J. (2015).
Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a population scale.
GigaScience,
4, 64.
https://doi.org/10.1186/s13742-015-0103-4
Verhoef, E.
, Grove, J., Shapland, C. Y.
, Demontis, D., Burgess, S., Rai, D.
, Børglum, A. D. & St Pourcain, B. (2021).
Discordant associations of educational attainment with ASD and ADHD implicate a polygenic form of pleiotropy.
Nature Communications,
12, Article 6534.
https://doi.org/10.1038/s41467-021-26755-1
Besenbacher, S., Hvilsom, C., Marques-Bonet, T.
, Mailund, T. & Schierup, M. H. (2019).
Direct estimation of mutations in great apes reconciles phylogenetic dating.
Nature Ecology & Evolution,
3(2), 286-292.
https://doi.org/10.1038/s41559-018-0778-x
Thuillet, A.-C., Bru, D., David, J., Roumet, P., Santoni, S., Sourdille, P.
& Bataillon, T. (2002).
Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf.
Molecular Biology and Evolution,
19(1), 122-5.
Muyle, A., Martin, H., Zemp, N.
, Mollion, M., Gallina, S., Tavares, R., Silva, A.
, Bataillon, T., Widmer, A., Glémin, S., Touzet, P. & Marais, G. A. B. (2021).
Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene.
Molecular Biology and Evolution,
38(3), 805-818.
https://doi.org/10.1093/molbev/msaa229