Publications

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Warrier, V., Zhang, X., Reed, P., Havdahl, A., Moore, T. M., Cliquet, F., Leblond, C. S., Rolland, T., Rosengren, A., Rowitch, D. H., Hurles, M. E., Geschwind, D. H., Børglum, A. D., Robinson, E. B., Grove, J., Martin, H. C., Bourgeron, T., Baron-Cohen, S., EU-AIMS LEAP ... Spectrum 10K and APEX Consortia (2022). Genetic correlates of phenotypic heterogeneity in autism. Nature Genetics, 54(9), 1293-1304. https://doi.org/10.1038/s41588-022-01072-5

Hernandez-de Sosa, N., Athanasiadis, G., Malouf, J., Laiz, A., Muñoz-Marin, A. M., Herrera, S., Farrerons, J., Soria, J. M. & Casademont, J. (2016). Genetic Contribution of Femoral Neck Bone Geometry to the Risk of Developing Osteoporosis: A Family-Based Study. PLoS One, 11(5), Article 0154833. https://doi.org/10.1371/journal.pone.0154833

Christiansen, F. (1990). Genetic comparisons of life stages in natural populations of Zoarces viviparus. In J. Adams, A. Hermalin, D. Lam & P. Smouse (Eds.), Convergent Issues in Genetics and Demography (pp. 287-305). Oxford University Press.

Thomsen, P. H. (1997). Genetic aspects of obsessive-compulsive disorder: A review. Nordic Journal of Psychiatry, Supplement, 51(1), 15-20. https://doi.org/10.3109/08039489709109079

Grotzinger, A. D., Mallard, T. T., Akingbuwa, W. A., Ip, H. F., Adams, M. J., Lewis, C. M., McIntosh, A. M., Grove, J., Dalsgaard, S., Lesch, K. P., Strom, N., Meier, S. M., Mattheisen, M., Børglum, A. D., Mors, O., Breen, G., iPSYCH, Tourette Syndrome and Obsessive Compulsive Disorder Working Group of the Psychiatric Genetics Consortium, Bipolar Disorder Working Group of the Psychiatric Genetics Consortium ... Nivard, M. G. (2022). Genetic architecture of 11 major psychiatric disorders at biobehavioral, functional genomic and molecular genetic levels of analysis. Nature Genetics, 54(5), 548-559. https://doi.org/10.1038/s41588-022-01057-4

Hammami, H., Colinet, F. G., Bastin, C., Grelet, C., Vanlierde, A., Dehareng, F., Gengler, N. & GplusE Consortium (2017). Genetic analysis of milk MIR predicted blood and milk biomarkers linked to the physiological status. In Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science (pp. 403-403). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-859-9

Christiansen, F., Nielsen, B. V. & Simonsen, V. (1981). Genetical and morphological variation in the eelpout Zoarces viviparus. Genome, 23, 163-172.

Feldman, M. W., Otto, S. P. & Christiansen, F. B. (2000). Genes, Culture and Inequality. In K. Arrow, S. Bowles & S. Durlauf (Eds.), Meritocracy and Economic Inequality (pp. 61–85). Princeton University Press.

Mailund, T. (2006). GeneRecon Users' Manual — A coalescent based tool for fine-scale association mapping.

Mailund, T., Schierup, M. H., Pedersen, C. N. S., Madsen, J. N., Hein, J. & Schauser, L. (2006). GeneRecon—A coalescent based tool for fine-scale association mapping. Bioinformatics, 22(18), 2317–2318.

Maetschke, S. R., Simonsen, M., Davis, M. J. & Mark, A. (2011). Gene Ontology-driven inference of protein-protein interactions using inducers. Bioinformatics, 28(1), 69-75. https://doi.org/10.1093/bioinformatics/btr610

Hein, J., Schierup, M. H. & Wiuf, C. (2004). Gene genealogies, variation and evolution: A primer in coalescent theory.

Feldman, M. W., Christiansen, F. B. & Otto, S. P. (2013). Gene-culture co-evolution: teaching, learning, and correlations between relatives. Israel Journal of Ecology and Evolution, 59(2), 72-91. https://doi.org/10.1080/15659801.2013.853435

Kjeldbjerg, A., Villesen, P., Aagaard, L. & Pedersen, F. S. (2008). Gene conversion and purifying selection of a placenta-specific ERV-V envelope gene during simian evolution. BMC Evolutionary Biology, 8(1), 266. https://doi.org/10.1186/1471-2148-8-266

Fredslund, J., Madsen, L. H., Hougaard, B. K., Sandal, N. N., Stougaard, J., Bertioli, D. & Schauser, L. (2006). GeMprospector - online design of cross-species genetic marker candidates in legumes and grasses. Nucleic Acids Research, 34, W670-W675.

Lassalle, F., Périan, S., Bataillon, T., Nesme, X., Duret, L. & Daubin, V. (2015). GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands. PLoS Genetics, 11(2), e1004941. https://doi.org/10.1371/journal.pgen.1004941

Rani, S., Sørensen, M. T., Estellé, J., Noel, S. J., Nørskov, N., Krogh, U., Foldager, L. & Højberg, O. (2023). Gastrointestinal Microbial Ecology of Weaned Piglets Fed Diets with Different Levels of Glyphosate. Microbiology Spectrum, 11(4), Article e0061523. https://doi.org/10.1128/spectrum.00615-23

Stukenbrock, E. H., Christiansen, F. B., Hansen, T. T., Dutheil, J. & Schierup, M. H. (2012). Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species. Proceedings of the National Academy of Sciences (PNAS), 107(27). https://doi.org/10.1073/pnas.1201403109

Sørensen, J. L., Knudsen, M., Hansen, F. T., Olesen, C., Romans Fuertes, P., Lee, T. V., Søndergaard, T. E., Pedersen, C. N. S., Brodersen, D. E. & Giese, H. (2014). Fungal NRPS-dependent siderophores: From function to prediction. In J.-F. Martin, C. Garcia-Estrada & S. Zeilinger (Eds.), Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites (pp. 317-339). Springer. https://doi.org/10.1007/978-1-4939-1191-2_15

Mailund, T. (2017). Functional Programming in R: Advanced Statistical Programming for Data Science, Analysis and Finance . Apress.

Mailund, T. (2017). Functional data structures in R: advanced statistical programming in R. Apress. https://doi.org/10.1007/978-1-4842-3144-9

Sukosd, Z., Andersen, E. S., Seemann, S. E., Jensen, M., Hansen, M. B., Gorodkin, J. & Kjems, J. (2015). Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain. Nucleic Acids Research, 43(21), 10168-10179. https://doi.org/10.1093/nar/gkv1039

Bataillon, T., Gauthier, P., Villesen, P., Santoni, S., Thompson, J. D. & Ehlers, B. K. (2022). From genotype to phenotype: Genetic redundancy and the maintenance of an adaptive polymorphism in the context of high gene flow. Evolution Letters, 6(2), 189-202. https://doi.org/10.1002/evl3.277

Ratmann, O., Wiuf, C. H. & Pinney, J. W. (2009). From evidence to inference: probing the evolution of protein interaction networks. HFSP Journal, 3(5), 290-306. https://doi.org/10.2976/1.3167215

Andersen, C. L., Wiuf, C., Kruhøffer, M., Korsgaard, M., Laurberg, S. & Ørntoft, T. F. (2007). Frequent occurrence of uniparental disomy in colorectal cancer. Carcinogenesis, 28(1), 38-48. https://doi.org/10.1093/carcin/bgl086

Andersen, C. L., Lamy, P., Thorsen, K., Kjeldsen, E., Wikman, F., Villesen, P., Øster, B., Laurberg, S. & Ørntoft, T. F. (2010). Frequent genomic loss at chr16p13.2 is associated with poor prognosis in colorectal cancer. International Journal of Cancer. https://doi.org/10.1002/ijc.25841

Christiansen, F. (1988). Frequency-dependence and competition. Philosophical Transactions of the Royal Society B: Biological Sciences, 319, 587-600.

Westbury, M. V., Brown, S. C., Cabrera, A. A., Morales, H. E., Parreira, B., Ma, J., Coll Macià, M., Rey-Iglesia, A., Dyke, A., Scharff-Olsen, C. H., Scott, M. B., Wiig, Ø., Bachmann, L., Kovacs, K. M., Lydersen, C., Ferguson, S. H., Szpak, P., Fordham, D. A. & Lorenzen, E. D. (2026). Four centuries of commercial whaling eroded 11,000 years of population stability in bowhead whales. Cell, 189(7), 2040-2053.e19. https://doi.org/10.1016/j.cell.2026.02.022

Malmos, K., Dong, M., Besenbacher, F., Daasbjerg, K. & Pedersen, S. U. (2007). Formation with the use of Electrostatic Repulsion of Covalent Attached Thin Layer on Glassy Carbon Surface. Paper presented at Electrochemical Science and Technology, Aarhus, Denmark.

Thøgersen, L. & Nissen, P. (2012). Flexible P-type ATPases interacting with the membrane. Current Opinion in Structural Biology, 22(4), 491-499. https://doi.org/10.1016/j.sbi.2012.05.009

Anciaux, Y. E. (2019). Fitness Lanscape properties across environments: How to infer Fisher's Geometric Model properties from empirical fitness landscapes across environements . Poster session presented at Nordita meeting, Stockholm, Sweden.

Hargreaves, A., Bailey, S. & Laird, R. (2015). Fitness declines towards range limits and local adaptation to climate affect dispersal evolution during climate‐induced range shifts. Journal of Evolutionary Biology, 28(8), 1489-1501. https://doi.org/10.1111/jeb.12669

Lee, Y. L., Takada, H., Moreira, G. C. M., Karim, L., GplusE Consortium, Bosse, M., Bouwman, A., Mullaart, E., Coppieters, W., Georges, M., Druet, T. & Charlier, C. (2020). Fine resolution CNV catalogue from deeply sequenced cattle genomes. In Book of Abstracts of the 71st Annual Meeting of the European Federation of Animal Science (Vol. 26, pp. 188). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-900-8

Privé, F., Zhu, Z. & Vilhjalmsson, B. J. (2021). Finding hidden treasures in summary statistics from genome-wide association studies. Nature Genetics, 53(4), 431-432. https://doi.org/10.1038/s41588-021-00824-z

Fredslund, J. (2005). Feelix. In H. Domaine (Ed.), Robotics: Cool Science Lerner Publications.

Fredslund, J. (2004). Feelix. In R. F. Bridgman (Ed.), Robot: Eyewitness Dorling Kindersley.

Giagnoni, G., Lassen, J., Lund, P., Foldager, L., Johansen, M. & Weisbjerg, M. R. (2024). Feed intake in housed dairy cows: validation of a three-dimensional camera−based feed intake measurement system. Animal, 18(6), Article 101178. https://doi.org/10.1016/j.animal.2024.101178

Lashkari, S., Weisbjerg, M. R., Foldager, L. & Børsting, C. F. (2024). Fat supplement for dairy cows during early lactation – potentials, challenges, and risks – a meta-analysis. Journal of Applied Animal Research, 52(1), Article 2323625. https://doi.org/10.1080/09712119.2024.2323625

Lashkari, S., Weisbjerg, M. R., Foldager, L. & Børsting, C. F. (2022). Fat supplement for dairy cow diets during early lactation – meta analysis. In Book of Abstracts of the 73rd Annual Meeting of the European Federation of Animal Science (pp. 668-668). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-937-4

Penner, R., Knudsen, M., Wiuf, C. H. & Andersen, J. E. (2010). Fatgraph Models of Proteins. Communications on Pure and Applied Mathematics, 63(10), 1249-1297. https://doi.org/10.1002/cpa.20340

Fredsted, T. & Villesen, P. (2004). Fast, reliable sexing of prosimian DNA. American Journal of Primatology, 64, 345-350.

Sendrowski, J. & Bataillon, T. (2024). FastDFE: Fast and Flexible Inference of the Distribution of Fitness Effects. Molecular Biology and Evolution, 41(5), Article msae070. https://doi.org/10.1093/molbev/msae070

Christiansen, C., Mailund, T., Pedersen, C. N. S., Randers, M. & Stissing, M. (2006). Fast Calculation of the Quartet Distance Between Trees of Arbitrary Degrees. Algorithms for Molecular Biology, 1(16).

Villesen, P. & Fredsted, T. (2006). Fast and non-invasive PCR sexing of primates: apes, Old World monkeys, New World monkeys and Strepsirrhines. BMC Ecology, 6(8).

Cheng, J. Y., Mailund, T. & Nielsen, R. (2017). Fast admixture analysis and population tree estimation for SNP and NGS data. Bioinformatics (Online), 33(14), 2148–2155. https://doi.org/10.1093/bioinformatics/btx098

Hanghøj, K., Seguin, A., Schubert, M., Madsen, T., Pedersen, J. S., Willerslev, E. & Orlando, L. (2016). Fast, accurate and automatic ancient nucleosome and methylation maps with epiPALEOMIX. Molecular Biology and Evolution, 33(12), 3284-3298. https://doi.org/10.1093/molbev/msw184

Foldager, L. (2025). FAIR data and Open Science: some insights from a work package in the PIGWEB project. In P. Linde (Ed.), Symposium i Anvendt Statistik 2025 (pp. 49-54). Økonomisk Institut og Klinisk Institut, Syddansk Universitet & Symposium i Anvendt Statistik. http://www.statistiksymposium.dk/Symposium%202025%20hele%20bogen%20(10%20MB).pdf

Eskildsen, S. J., Hansen, C. A., Kallemose, T., Curtis, D. J., Wessel, I. & Poulsen, I. (2024). Factors Associated With Time to Decannulation in Patients With Tracheostomy Following Severe Traumatic Brain Injury. Respiratory Care, 69(5), 566-574. https://doi.org/10.4187/respcare.11376

Thuillet, A.-C., Bataillon, T., Sourdille, P. & David, J. L. (2004). Factors affecting polymorphism at microsatellite loci in bread wheat [ Triticum aestivum (L.) Thell]: effects of mutation processes and physical distance from the centromere. Theoretical and Applied Genetics, 108(2), 368-77. https://doi.org/10.1007/s00122-003-1443-5

Jimenez Mena, B., Verrier, E. & Hospital, F. (2014). Facing the estimation of effective population size based on molecular markers: comparison of estimators.. Abstract from World Congress on Genetics Applied to Livestock Production, Vancouvers, Canada. https://asas.org/docs/default-source/wcgalp-posters/440_paper_9030_manuscript_372_0.pdf?sfvrsn=2

Displaying results 851 to 900 out of 1417

Revised 13.01.2026

Palle Villesen