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Software

This page contains a list of actively maintained software, that has been developed at BiRC. If you have any questions regarding a particular piece of software/wwwservice please contact the person responsible (listed to the right of each software description).


If you are employed at BiRC and want you software listed on this page, please contact Palle Villesen Fredsted.

WWW Services

FaBox

FASTA online toolbox

Palle Villesen Fredsted

RecPars

Phylogenetic analysis using a parsimony analysis that takes recombination events into account.

Mikkel Heide Schierup

RetroSearch

Database of ORF annotated human endogenous retroviruses.

Palle Villesen Fredsted

Downloadable Software

Blossoc

Block-Association Mapping.

Thomas Mailund

CoAnnealing

Simulated Annealing Search for Coalescent Trees.

Thomas Mailund

CoaSim

Simulating the coalescent process.

Thomas Mailund

GeneRecon

A coalescent based tool for fine-scale association mapping.

Thomas Mailund

HapCluster++

HapCluster++ is a software package for association mapping.

Thomas Mailund

QDist

Computation of the quartet distance between evolutationary trees.

Thomas Mailund

QuickJoin

A tool for fast canonical neighbor-joining tree construction but use RapidNJ instead.

Thomas Mailund

RapidNJ

A tool for fast canonical neighbor-joining tree construction.

Martin Simonsen

Split-dist

Split-Dist calculates the number of splits (edges) that differs for two trees.

Thomas Mailund

Comments on content: Palle Villesen
Revised: 04.09.2009