BYOB

Meetings

2018  
 

June 1, 2018:

May 25, 2018

May 18, 2018:

May 11, 2018:

May 4, 2018:

April 27, 2018: No jounal club (holiday)

April 20, 2018: 2, 2018: Thomas Bataillon:

April 13, 2018: Laurits

April 6, 2018: Elise

March 30, 2018: no journal club (holiday)

March 23, 2018

March 16, 2018: Moises

March 9, 2018: Svend Nielsen: On Friday I will present the attached paper 'A Spatial Framework for Understanding Population Structure and Admixture'(2016).

March 2, 2018: Thomas Bataillon: Bay et al.: Genomic signals of selection predict climate-driven population declines in a migratory bird (Science 2018)

February 23, 2018: Matthew Hartfield: Murray et al.: Natural selection shaped the rise and fall of passenger pigeon genomic diversity. DOI: 10.1126/science.aao0960

2017  

 
Dec 8, 2017: Asger Hobolth: 'Analysis of Population Structure: A Unifying Framework and Novel Methods Based on Sparse Facor Analysis' by B. Engelhardt & M. Stephens.

Nov 1st: Thomas Bataillon: 'Faster Evolving Primate Genes are more Likely to Dublicate' by O'Toole, Hurst & McLysaght,

Nov 24, 2017: David Castallano: 'Deleterious variation mimics signatures of genomic incompatibility and adaptive introgression' - www.biorxiv.org/content/early/2017/11/17/221705

Nov 17, 2017: No club

Nov 10, 2017: No club (Tanja Slotte seminar)

Nov 3, 2017: Mikkel Schierup: 'Loci associated with skin pigmentation identified in African populations'  by Crawford et al, http://science.sciencemag.org/content/early/2017/10/11/science.aan8433

Oct 27, 2017: No club (school holidays)

Oct 20, 2017: Kasper Munch: ' Signatures of long-term balancing selection in human genomes',

https://www.biorxiv.org/content/early/2017/07/24/119529

Oct 13, 2017: No club (Kai Zeng seminar)

Oct 6, 2017: Svend Nielsen:  I will present  Minimal-assumption inference from population-genomic data by Weissman and Hallatschek (2017). It is a new method for estimating the distribution of coalescence times - which they then use to estimate population parameters. 

Sept 29, 2017: Elise Lucotte: "Sex-biased gene expression resolves sexual conflict through the evolution of sex-specific genetic architecture”, by Wright et al. 2017 (on bioRxiv). Find it here: https://www.biorxiv.org/content/early/2017/08/16/176990

Sept 22, 2017: Cancelled due to ProbGen17

Sept 15, 2017: Matthew Hartfield: "Negative selection in humans and fruit flies involves synergistic epistasis" (http://science.sciencemag.org/content/356/6337/539).

----

May 5, 2017: Maria Simonsen: Park et al. (2011): “Distribution of allele frequencies and effect sizes and their interrelationships for common genetic susceptibility variants” 

April 28, 2017: Cancelled

April 21, 2017: Marni Tausen: Metagenomic Predictions: From Microbiome to Complex Health and Environmental Phenotypes in Humans and Cattle.

March 31, 2017: Kasper Munch: Ancient hybridization and strong adaptation to viruses across African
vervet monkey populations. http://dx.doi.org/10.1101/088989

March 17, 2017: Maria Izabel Alves: The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection (in nature genetics). doi:10.1038/ng.3657

March 10, 2017 David Castellano: Evidence that Adaptation in Drosophila Is Not Limited by Mutation at Single Sites. http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1000924

March 3, 2017 Matthew Hartfield: Experimental test and refutation of a classic case of molecular adaptation in Drosophila melanogaster: http://www.nature.com/articles/s41559-016-0025

Feb 10, 2017 Elise Lucotte: Innocenti & Morrow PLOS Biology 2010

Feb 3, 2017 Laurits Skov: Detecting ancient positive selection in humans using extended lineage sorting. http://biorxiv.org/content/biorxiv/early/2016/10/26/083634.full.pdf

Jan 27, 2017 Thomas B: Detection of human adaptation during the past 2,000 years:
http://biorxiv.org/content/early/2016/05/07/052084

 

2016

Dec 9, 2016: Maria Simonsen, Xmas special : Fst @STR loci  & human forensics. doi: 10.1111/ahg.12081

http://onlinelibrary.wiley.com/doi/10.1111/ahg.12081/epdf

Nov 25, 2016: Jonas Berglund: Companion paper.
http://www.cell.com/cell-systems/fulltext/S2405-4712(16)30183-1

Nov 18, 2016: Kalle Leppälä: (TO BE CONFIRMED): Inference of ancestral recombination graphs through topological data analysis" by P. G. Cámara, A. J. Levine and R. Rabadán.
http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005071

Nov 11, 2016: Matthew Hartfield:

Nov 4, 2016: Asger: Inferring Population Size History from Large Samples of Genome-Wide Molecular Data - An Approximate Bayesian Computation Approach, By Boitard et al, PLOS Genetics 2016 http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005877

Oct 28, 2016:  Thomas Bataillon:Sex Specific Selection and Sex biased gene expression in humans and flies by Cheng & Kirkpatrick, PLOS Genetics 2016
http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006170

Oct 14, 2016: Miguel: A genomic history of Aboriginal Australia, Nature. doi:10.1038/nature18299

Oct 7, 2016: Maria Izabel: The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection, Nature Genetics

Sept 23, 2016:  Kasper Munch: The Simons Diversity Project,Nature doi:10.1038/nature18964

Sept 16, 2016: Thomas Bataillon: Determining the factors driving selective effects of new nonsynonymous mutations,bioRxiv preprint first posted online Aug. 23, 2016;