Publications

Sort by: Date | Author | Title

Antaki, D., Guevara, J., Maihofer, A. X., Klein, M., Gujral, M., Grove, J., Carey, C. E., Hong, O., Arranz, M. J., Hervas, A., Corsello, C., Vaux, K. K., Muotri, A. R., Iakoucheva, L. M., Courchesne, E., Pierce, K., Gleeson, J. G., Robinson, E. B., Nievergelt, C. M. & Sebat, J. (2022). Publisher Correction: A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex. Nature Genetics, 54(8), Article 1259. https://doi.org/10.1038/s41588-022-01145-5

Andreasen, V. & Christiansen, F. (1989). Persistence of an infectious disease in a subdivided population. Mathematical Biosciences, 96, 239-253.

Anderson, J. WJ., Tataru, P. C., Stains, J., Hein, J. & Lyngsø, R. (2012). Evolving stochastic context-free grammars for RNA secondary structure prediction. BMC Bioinformatics, 13(78). https://doi.org/10.1186/1471-2105-13-78

Anderson, J. W. J., Haas, P. A., Mathieson, L.-A., Volynkin, V., Lyngsø, R., Tataru, P. & Hein, J. (2013). Oxfold: Kinetic Folding of RNA using Stochastic Context-Free Grammars and Evolutionary Information. Bioinformatics, 29(6), 704-710. https://doi.org/10.1093/bioinformatics/btt050

Anderson, J. W., Novák, A., Sükösd, Z., Golden, M., Arunapuram, P., Edvardsson, I. & Hein, J. (2013). Quantifying variances in comparative RNA secondary structure prediction. BMC Bioinformatics, 14, Article 149. https://doi.org/10.1186/1471-2105-14-149

Andersen, E. S., Rosenblad, M. A., Larsen, N., Westergaard, J. C., Burks, J., Wower, I. K., Wower, J., Gorodkin, J., Samuelsson, T. & Zwieb, C. (2006). The tmRDB and SRPDB resources. Nucleic Acids Res. , 34(Database issue), D163-8.

Andersen, C. L., Wiuf, C., Kruhøffer, M., Korsgaard, M., Laurberg, S. & Ørntoft, T. F. (2007). Frequent occurrence of uniparental disomy in colorectal cancer. Carcinogenesis, 28(1), 38-48. https://doi.org/10.1093/carcin/bgl086

Andersen, L. N. & Asmussen, S. (2008). Parallel computing, failure recovery and extreme values. Journal of Statistical Theory and Practice, 2(2), 279-292.

Andersen, L. N. & Mandjes, M. (2009). Structural properties of reflected Lévy processes. Queueing Systems, 63(1-4), 301-322. https://doi.org/10.1007/s11134-009-9116-y

Andersen, C. L., Lamy, P., Thorsen, K., Kjeldsen, E., Wikman, F., Villesen, P., Øster, B., Laurberg, S. & Ørntoft, T. F. (2010). Frequent genomic loss at chr16p13.2 is associated with poor prognosis in colorectal cancer. International Journal of Cancer. https://doi.org/10.1002/ijc.25841

Andersen, F. F., Villesen, P., Knudsen, B., Wiuf, C. H., Desideri, A. & Knudsen, B. R. (2011). Utilization of Computer Science for Construction and Characterization of DNA nano-Structures. In DNA Microarrays, Synthesis and Synthetic DNA Nova Science Publishers.

Andersen, L. N. (2011). Subexponential loss rate asymptotics for Lévy processes. Mathematical Methods of Operations Research, 73(1), 91-108. https://doi.org/10.1007/s00186-010-0335-0

Andersen, L. N. & Asmussen, S. (2011). Local time asymptotics for centered Lévy processes with two-sided reflection. Stochastic Models, 27(2), 202-219. https://doi.org/10.1080/15326349.2011.567928

Andersen, L. N. (2011). Inferring Population Histories In The IM-model Using Site Pattern Analysis. Poster session presented at SMBE 2011, Kyoto, Japan.

Andersen, L. N., Mailund, T. & Hobolth, A. (2014). Efficient computation in the IM model. Journal of Mathematical Biology, 68(6), 1423-1451. https://doi.org/10.1007/s00285-013-0671-9

Andersen, H. M.-L., Jørgensen, E., Pedersen, L. J. & Foldager, L. (2015). Can use of online measurements in EVOP designs reduce the time to locate production optimum? In M. Guarino & D. Berckmans (Eds.), Precision Livestock Farmin '15: Papers presented at the 7th European Conference on Precision Livestock Farming (pp. 269-275)

Andersen, L., Christensen, D. S., Kjær, A., Knudsen, M., Andersen, A. K., Laursen, M. B., Ahrenfeldt, J., Laursen, B. E. & Birkbak, N. J. (2024). Exploring the molecular landscape of cancer of unknown primary: A comparative analysis with other metastatic cancers. Molecular Oncology, 18(10), 2393-2406. https://doi.org/10.1002/1878-0261.13664

Andersen, L., Kisistók, J., Henriksen, T. V., Bramsen, J. B., Reinert, T., Øgaard, N., Mattesen, T. B., Birkbak, N. J. & Andersen, C. L. (2024). Exploring the biology of ctDNA release in colorectal cancer. European Journal of Cancer, 207, Article 114186. https://doi.org/10.1016/j.ejca.2024.114186

Andersen, L. & Birkbak, N. J. (2025). Advancing circulating tumor DNA detection: Using whole-genome sequencing to power minimal residual disease monitoring in breast cancer. Annals of Oncology, 36(6), 609-611. https://doi.org/10.1016/j.annonc.2025.03.008

Andersen, L., Lindskrog, S. V., Nordentoft, I., Frydendahl, A., Nors, J., Henriksen, T. V., Rasmussen, M. H., Iversen, L. H., Gotschalck, K. A., Jensen, J. B., Dyrskjøt, L., Andersen, C. L. & Birkbak, N. J. (2026). Cell-Free DNA-Derived Immune Cell Ratios Uncover Cancer-Associated Systemic Changes. Cancer Research Communications, 6(4), 811-820. https://doi.org/10.1158/2767-9764.CRC-25-0747

Anciaux, Y., Lambert, A., Ronce, O., Roques, L. & Martin, G. (2019). Population persistence under high mutation rate: From evolutionary rescue to lethal mutagenesis. Evolution, 73(8), 1517-1532. https://doi.org/10.1111/evo.13771

Anciaux, Y. E. (2019). Fitness Lanscape properties across environments: How to infer Fisher's Geometric Model properties from empirical fitness landscapes across environements . Poster session presented at Nordita meeting, Stockholm, Sweden.

Amorim Franchi, G., Jensen, M. B., Foldager, L., Larsen, M. & Herskin, M. S. (2022). Effects of dietary and milking frequency changes and administration of cabergoline on clinical udder characteristics in dairy cows during dry-off. Research in Veterinary Science, 143, 88-98. https://doi.org/10.1016/j.rvsc.2021.12.019

Amorim Franchi, G., Larsen, M. L. V., Herskin, M. S., Foldager, L., Larsen, M. & Jensen, M. B. (2022). Effects of changes in diet energy density and milking frequency and a single injection of cabergoline at dry-off on feeding behavior and rumination time in dairy cows. JDS Communications , 3(3), 195-200. https://doi.org/10.3168/jdsc.2021-0162

AlZaim, I., Hassan, M. N., Schröter, M., Mannino, L., Dragicevic, K., Sjogaard, M. B., Festa, J., Dokshokova, L., Weinbrenner, S., Tardajos Ayllon, B., Hansen, B., Rasmussen, R. K., Christensen, J. N., Wagman, O., Schipper, R., Cai, M., Dheedene, W., Bohn, A. B., Farup, J. ... Kalucka, J. (2025). Defining the vascular niche of human adipose tissue across metabolic states. bioRxiv. https://doi.org/10.1101/2024.09.22.610444

AlZaim, I., Hassan, M. N., Schröter, M., Mannino, L., Dragicevic, K., Sjogaard, M. B., Festa, J., Dokshokova, L., Weinbrenner, S., Tardajos Ayllon, B., Hansen, B., Rasmussen, R. K., Christensen, J. N., Wagman, O., Schipper, R., Cai, M., Dheedene, W., Bohn, A. B., Farup, J. ... Kalucka, J. (2026). Defining the vascular niche of human adipose tissue across metabolic states. Nature Metabolism, 8(3), 722-740. https://doi.org/10.1038/s42255-026-01475-2

Álvarez-Álvarez, M. M., Zanetti, D., Carreras-Torres, R., Moral, P. & Athanasiadis, G. (2017). A survey of sub-Saharan gene flow into the Mediterranean at risk loci for coronary artery disease. European Journal of Human Genetics, 25(4), 472-476. https://doi.org/10.1038/ejhg.2016.200

Alsner, J., Toustrup, K., Sørensen, B. S., Wiuf, C. H., Nordsmark, M. & Overgaard, J. (2012). Method for determining clinically relevant hypoxia in cancer. (Patent No. WO/2012/146259).

Al-Sawaf, O., Weiss, J., Skrzypski, M., Lam, J. M., Karasaki, T., Zambrana, F., Kidd, A. C., Frankell, A. M., Watkins, T. B. K., Martínez-Ruiz, C., Puttick, C., Black, J. R. M., Huebner, A., Bakir, M. A., Collins, S., Veeriah, S., Magno, N., Naceur-Lombardelli, C., Prymas, P. ... TRACERx Consortium (2023). Body composition and lung cancer-associated cachexia in TRACERx. Nature Medicine, 29(4), 846-858. https://doi.org/10.1038/s41591-023-02232-8

Als, T. D., Lescai, F., Dahl, H. A., Grove, J., Demontis, D., Wang, A. G., Andorsdottir, G., Biskopstø, M., Johansen, O., Nyegaard, M., Bolund, L., Mors, O., Wang, J. & Børglum, A. (2014). Population Structure & Cryptic Relatedness of the isolated Population of the Faroe Islands. Poster session presented at XXII World Congress of Psychiatric Genetics, København, Denmark.

Als, T. D., Lescai, F., Dahl, H., Demontis, D., Wang, A., Andorsdottir, G., Biskopstø, M., Johansen, O., Grove, J., Nyegaard, M., Bolund, L., Mors, O., Jun, W. & Børglum, A. (2015). Identifying Rare Variation in Cases of Schizophrenia in the Isolated Population of the Faroe Islands using Whole-genome Sequencing. Poster session presented at XXIII World Congress of Psychiatric Genetics, Toronto, Canada.

Als, T. D., Kurki, M. I., Grove, J., Voloudakis, G., Therrien, K., Tasanko, E., Nielsen, T. T., Naamanka, J., Veerapen, K., Levey, D. F., Bendl, J., Bybjerg-Grauholm, J., Zeng, B., Demontis, D., Rosengren, A., Athanasiadis, G., Bækved-Hansen, M., Qvist, P., Bragi Walters, G. ... Børglum, A. D. (2023). Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses. Nature Medicine, 29(7), 1832-1844. https://doi.org/10.1038/s41591-023-02352-1

Albiñana, C., Grove, J., McGrath, J. J., Agerbo, E., Wray, N. R., Bulik, C. M., Nordentoft, M., Hougaard, D. M., Werge, T., Børglum, A. D., Mortensen, P. B., Privé, F. & Vilhjálmsson, B. J. (2021). Leveraging both individual-level genetic data and GWAS summary statistics increases polygenic prediction. American Journal of Human Genetics, 108(6), 1001-1011. https://doi.org/10.1016/j.ajhg.2021.04.014

Albiñana, C., Boelt, S. G., Cohen, A. S., Zhu, Z., Musliner, K. L., Vilhjálmsson, B. J. & McGrath, J. J. (2022). Developmental exposure to vitamin D deficiency and subsequent risk of schizophrenia. Schizophrenia Research, 247, 26-32. https://doi.org/10.1016/j.schres.2021.06.004

Albiñana, C., Zhu, Z., Borbye-Lorenzen, N., Boelt, S. G., Cohen, A. S., Skogstrand, K., Wray, N. R., Revez, J. A., Privé, F., Petersen, L. V., Bulik, C. M., Plana-Ripoll, O., Musliner, K. L., Agerbo, E., Børglum, A. D., Hougaard, D. M., Nordentoft, M., Werge, T., Mortensen, P. B. ... McGrath, J. J. (2023). Genetic correlates of vitamin D-binding protein and 25-hydroxyvitamin D in neonatal dried blood spots. Nature Communications, 14(1), Article 852. https://doi.org/10.1038/s41467-023-36392-5

Albiñana, C., Zhu, Z., Schork, A. J., Ingason, A., Aschard, H., Brikell, I., Bulik, C. M., Petersen, L. V., Agerbo, E., Grove, J., Nordentoft, M., Hougaard, D. M., Werge, T., Børglum, A. D., Mortensen, P. B., McGrath, J. J., Neale, B. M., Privé, F. & Vilhjálmsson, B. J. (2023). Multi-PGS enhances polygenic prediction by combining 937 polygenic scores. Nature Communications, 14(1), Article 4702. https://doi.org/10.1038/s41467-023-40330-w

Ahrenfeldt, J., Christensen, D. S., Sokač, M., Kisistók, J., McGranahan, N. & Birkbak, N. J. (2022). Computational Analysis Reveals the Temporal Acquisition of Pathway Alterations during the Evolution of Cancer. Cancers, 14(23), Article 5817. https://doi.org/10.3390/cancers14235817

Ahrenfeldt, J., Christensen, D. S., Østergaard, A. B., Kisistók, J., Sokač, M. & Birkbak, N. J. (2023). The ratio of adaptive to innate immune cells differs between genders and associates with improved prognosis and response to immunotherapy. PLoS One, 18(2 ), Article e0281375. https://doi.org/10.1371/journal.pone.0281375

Ahrenfeldt, J., Carstensen, S., Eriksen, I. M. H. & Birkbak, N. J. (2024). Exploring the impact of body mass index on tumor biology and cancer development. Journal of Cancer Research and Clinical Oncology, 150(7), Article 372. https://doi.org/10.1007/s00432-024-05890-4

Ahdidan, J., Foldager, L., Rosenberg, R., Rodell, A., Videbech, P. & Mors, O. (2013). Hippocampal volume and serotonin transporter polymorphism in major depressive disorder. Acta Neuropsychiatrica, 25(4), 206-214. https://doi.org/10.1017/neu.2013.3

Agrawal, A. F. & Hartfield, M. (2016). Coalescence with background and balancing selection in systems with Bi- and uniparental reproduction: Contrasting partial asexuality and selfing. Genetics, 202(1), 313-326. https://doi.org/10.1534/genetics.115.181024

Agerbo, E., Mortensen, P. B., Wiuf, C., Pedersen, M. S., McGrath, J., Hollegaard, M. V., Nørgaard-Pedersen, B., Hougaard, D. M., Mors, O. & Pedersen, C. B. (2012). Modelling the contribution of family history and variation in single nucleotide polymorphisms to risk of schizophrenia: A Danish national birth cohort-based study. Schizophrenia Research, 134(2-3), 246-52. https://doi.org/10.1016/j.schres.2011.10.025

Agerbo, E., Sullivan, P. F., Vilhjálmsson, B. J., Pedersen, C. B., Mors, O., Børglum, A. D., Hougaard, D. M., Hollegaard, M. V., Meier, S., Mattheisen, M., Ripke, S., Wray, N. R. & Mortensen, P. B. (2015). Polygenic Risk Score, Parental Socioeconomic Status, Family History of Psychiatric Disorders, and the Risk for Schizophrenia: A Danish Population-Based Study and Meta-analysis. JAMA Psychiatry. https://doi.org/10.1001/jamapsychiatry.2015.0346

Agerbo, E., Trabjerg, B. B., Børglum, A. D., Schork, A. J., Vilhjálmsson, B. J., Pedersen, C. B., Hakulinen, C., Albiñana, C., Hougaard, D. M., Grove, J., McGrath, J. J., Bybjerg-Grauholm, J., Mors, O., Plana-Ripoll, O., Werge, T., Wray, N. R., Mortensen, P. B. & Musliner, K. L. (2021). Risk of Early-Onset Depression Associated With Polygenic Liability, Parental Psychiatric History, and Socioeconomic Status. Archives of General Psychiatry, 78(4), 387-397. https://doi.org/10.1001/jamapsychiatry.2020.4172

Adams, M. J., Howard, D. M., Luciano, M., Clarke, T.-K., Davies, G., Hill, W. D., Smith, D., Deary, I. J., Porteous, D. J., McIntosh, A. M., 23andMe Research Team & Major Depressive Disorder Working Group of the Psychiatric Genomic Consortium (2020). Genetic stratification of depression by neuroticism: revisiting a diagnostic tradition. Psychological Medicine, 50(15), 2526–2535. https://doi.org/10.1017/S0033291719002629

Abdulkadir, M., Larsen, J. T., Clausen, L., Hübel, C., Albiñana, C., Thornton, L. M., Vilhjálmsson, B. J., Bulik, C. M., Yilmaz, Z. & Petersen, L. V. (2024). Descriptives and genetic correlates of eating disorder diagnostic transitions and presumed remission in the Danish registry. medRxiv. https://doi.org/10.1101/2024.09.05.24313142

Abdallah, M., Larsen, N., Grove, J., Nørgaard-Pedersen, B., Mortensen, E. L. & Hougaard, D. M. (2011). Cytokine Levels In Amniotic Fluid: a Marker of Maternal Immune Activation. Abstract from International Meeting for Autism Research (IMFAR 2011), San Diego, CA, United States.

Abdallah, M., Grove, J. & David M. Hougaard, Bent Nørgaard-Pedersen, Fuad Ibrahimov, Erik L. Mortensen (2011). Autism spectrum disorders and maternal serum alpha-fetoprotein levels during pregnancy. Poster session presented at 10th World Congress of Biological Psychiatry, Prague, Czech Republic.

Abdallah, M., Larsen, N., Grove, J., Nørgaard-Pedersen, B., Hougaard, D. M. & Mortensen, E. L. (2011). Amniotic Fluid Chemokines Levels and Autism Spectrum Disorders, a study utilizing a Danish historic birth cohort. Abstract from World Congress of Epidemiology, Edinburgh, United Kingdom.

Abdallah, M., Larsen, N., Grove, J., Nørgaard-Pedersen, B., Thorsen, P., Mortensen, E. L. & Hougaard, D. M. (2012). Amniotic Fluid Chemokines and Autism Spectrum Disorders: An Exploratory Study Utilizing a Danish Historic Birth Cohort. Brain, Behavior, and Immunity, 26(1), 170-176. https://doi.org/10.1016/j.bbi.2011.09.003

Displaying results 1351 to 1400 out of 1417

Revised 13.01.2026

Palle Villesen