2018

• Winge, S. B., Dalgaard, M. D., Belling, K. G., et al., 1.6.2018, "Transcriptome analysis of the adult human Klinefelter testis and cellularity-matched controls reveals disturbed differentiation of Sertoli- and Leydig cells article", Cell Death and Disease. Journal article
• Bjerg, J. T., Boschker, H. T. S., Larsen, S., et al., 29.5.2018, "Long-distance electron transport in individual, living cable bacteria", Proceedings of the National Academy of Sciences of the United States of America. Journal article
• Lucotte, E. A., Skov, L., Jensen, J. M., Coll Macià, M., Munch, K., Schierup, M. H., 16.5.2018, "Dynamic Copy Number Evolution of X- and Y-Linked Ampliconic Genes in Human Populations", Genetics. Journal article
• Schumer, M., Xu, C., Powell, D. L., et al., 19.4.2018, "Natural selection interacts with recombination to shape the evolution of hybrid genomes", Science. Journal article
• Rousselle, M., Mollion, M., Nabholz, B., Bataillon, T., Galtier, N., 18.4.2018, "Overestimation of the adaptive substitution rate in fluctuating populations", Biology Letters. Journal article
• Ernst, E. H., Franks, S., Hardy, K., Villesen, P., Lykke-Hartmann, K., 1.4.2018, "Granulosa cells from human primordial and primary follicles show differential global gene expression profiles", Human Reproduction. Journal article
• , , Pardiñas, A. F., Holmans, P., et al., 3.2018, "Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection", Nature genetics. Journal article
• Søndergaard, D. A., 28.2.2018, "Classification and analysis of biological data". Ph.D. thesis
• Palkopoulou, E., Lipson, M., Mallick, S., et al., 26.2.2018, "A comprehensive genomic history of extinct and living elephants", Proceedings of the National Academy of Sciences of the United States of America. Journal article
• Munch, D., Gupta, V., Bachmann, A., et al., 2.2018, "The Brassicaceae family displays divergent, shoot-skewed NLR resistance gene expression", Plant Physiology. Journal article
• Mollion, M., 30.1.2018, "Inference on adaptation from population genomics data". Ph.D. thesis
• Kong, A., Thorleifsson, G., Frigge, M. L., et al., 26.1.2018, "The nature of nurture", Science. Journal article
• Hornshøj, H., Nielsen, M. M., Sinnott-Armstrong, N. A., et al., 11.1.2018, "Pan-cancer screen for mutations in non-coding elements with conservation and cancer specificity reveals correlations with expression and survival", npj Genomic Medicine. Journal article
• Salvador-Martínez, I., Coronado-Zamora, M., Castellano, D., Barbadilla, A., Salazar-Ciudad, I., 1.1.2018, "Mapping selection within Drosophila melanogaster embryo's anatomy", Molecular Biology and Evolution. Journal article
• Hartfield, M., 1.1.2018, "Digest", Evolution. Journal article
• Mollion, M., Ehlers, B., Figuet, E., et al., 1.2018, "Patterns of genome-wide nucleotide diversity in the gynodioecious plant Thymus vulgaris are compatible with recent sweeps of cytoplasmic genes", Genome Biology and Evolution. Journal article
• Winge, S. B., Dalgaard, M. D., Jensen, J. M., et al., 2018, "Transcriptome profiling of fetal Klinefelter testis tissue reveals a possible involvement of long non-coding RNAs in gonocyte maturation", Human Molecular Genetics. Journal article
• Foldager, L., Liu, Y., Pedersen, H. S., et al., 2018, "In-vitro fertilization and in-vitro embryo culture in mouse as a reprotoxicity model for xenobiotics: some considerations on how to analyse data and present results", Symposium i anvendt statistik 2018. Book chapter
• Gao, S., Hu, X., Xu, F., et al., 2018, "BS-virus-finder", GigaScience. Journal article
• , , , , Warrier, V., et al., 2018, "Genome-wide analyses of self-reported empathy", Translational Psychiatry. Journal article
• , , Hannon, E., Schendel, D., et al., 2018, "Elevated polygenic burden for autism is associated with differential DNA methylation at birth", Genome Medicine. Journal article

2017

• Mortensen, L. M., Lundbye-Christensen, S., Schmidt, E. B., et al., 22.12.2017, "Long-chain n-3 and n-6 polyunsaturated fatty acids and risk of atrial fibrillation", P L o S One. Journal article
• Bolvig, A. K., Nørskov, N., van Vliet, S., et al., 1.12.2017, "Rye bran modified with cell wall-degrading enzymes influences the kinetics of plant lignans but not of enterolignans in multicatheterized pigs", Journal of Nutrition. Journal article
• Aschard, H., Guillemot, V., Vilhjalmsson, B., et al., 1.12.2017, "Covariate selection for association screening in multiphenotype genetic studies", Nature Genetics. Journal article
• Okholm, T. L. H., Nielsen, M. M., Hamilton, M., et al., 28.11.2017, "Circular RNA expression is abundant and correlated to aggressiveness in early-stage bladder cancer", npj Genomic Medicine. Journal article
• Birkenkamp-Demtröder, K., Christensen, E., Nordentoft, I. K., et al., 14.11.2017, "Liquid Biopsies for monitoring treatment response and metastatic relapse in bladder cancer patients". Poster
• Prüfer, K., de Filippo, C., Grote, S., et al., 3.11.2017, "A high-coverage Neandertal genome from Vindija Cave in Croatia", Science. Journal article
• Stride Nielsen, L., Villesen, P., Lindholst, C., 1.11.2017, "Variation in chemical profiles within large seizures of cocaine bricks", Forensic Science International. Journal article
• Tataru, P., Mollion, M., Glémin, S., Bataillon, T., 1.11.2017, "Inference of distribution of fitness effects and proportion of adaptive substitutions from polymorphism data", Genetics. Journal article
• Esteve, D. C., James, J., Eyre-Walker, A., 1.11.2017, "Nearly Neutral Evolution Across the Drosophila melanogaster Genome", bioRxiv. Journal article
• Lasry, C., Guillemot, V., Lechat, P., Menager, H., Vilhjalmsson, B. J., Aschard, H., 11.2017, "Summary Statistic GWAS Joint Re-Analyses Across 30+Traits", Genetic Epidemiology. Conference abstract in journal
• Leppälä, K., Matala-aho, T., Törmä, T., 1.10.2017, "Rational approximations of the exponential function at rational points", Journal of Number Theory. Journal article
• Birkenkamp-Demtröder, K., Christensen, E., Nordentoft, I. K., et al., 25.9.2017, "Monitoring treatment response and metastatic relapse in advanced bladder cancer by liquid biopsy analysis", European Urology. Journal article
• Jónsson, H., Sulem, P., Kehr, B., et al., 21.9.2017, "Data Descriptor: Whole genome characterization of sequence diversity of 15,220 Icelanders", Scientific Data. Journal article
• Midzi, N., Mduluza, T., Mudenge, B., Foldager, L., Leutscher, P. D. C., 15.9.2017, "Decrease in Seminal HIV-1 RNA Load After Praziquantel Treatment of Urogenital Schistosomiasis Coinfection in HIV-Positive Men—An Observational Study", Open Forum Infectious Diseases. Journal article
• Villesen, P., Stride Nielsen, L., 14.9.2017, "Profiling of cocaine using ratios of GC-MS peaks", Scientific Reports. Journal article
• Jensen, J. M., Villesen, P., Friborg, R. M., et al., 9.2017, "Assembly and analysis of 100 full MHC haplotypes from the Danish population", Genome Research. Journal article
• Madsen, T., 31.8.2017, "Robust statistical methods for significance evaluation and applications in cancer driver detection and biomarker discovery". Ph.D. thesis
• Bechsgaard, J., Jorgensen, T. H., Schierup, M. H., 7.8.2017, "Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species", G3: Genes, Genomes, Genetics (Bethesda). Journal article
• Maretty, L., Jensen, J. M., Petersen, B., et al., 3.8.2017, "Sequencing and de novo assembly of 150 genomes from Denmark as a population reference", Nature. Journal article
• Skov, L., Schierup, M. H., , , 8.2017, "Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion", P L o S Genetics (Online). Journal article
• Skov, L., 31.7.2017, "Methods for analyzing genetic variation in modern and archaic humans". Ph.D. thesis
• Jensen, J. M., 27.7.2017, "Reference free phasing and representation of complex variation". Ph.D. thesis
• Cheng, J. Y., Mailund, T., Nielsen, R., 15.7.2017, "Fast admixture analysis and population tree estimation for SNP and NGS data", Bioinformatics (Online). Journal article
• Duan, J., Sanggaard, K. W., Schauser, L., et al., 13.7.2017, "Transcriptome Analysis of the Response of Burmese Python to Digestion", GigaScience. Journal article
• Søndergaard, D., Nielsen, S., Pedersen, C. N. S., Besenbacher, S., 7.7.2017, "Prediction of Primary Tumors in Cancers of Unknown Primary", Journal of integrative bioinformatics. Journal article
• Bertl, J., Guo, Q., Rasmussen, M. J., et al., 21.6.2017, "A Site Specific Model And Analysis Of The Neutral Somatic Mutation Rate In Whole-Genome Cancer Data". Working paper
• Grelet, C., Vanlierde, A., Salavati, M., et al., 15.6.2017, "Prediction of energy status of dairy cows using MIR milk spectra". Conference abstract for conference
• Gengler, N., Foldager, L., Larsen, T., Sørensen, M. T., Ingvartsen, K. L., Consortium, G., 15.6.2017, "Targeted combination of estimated breeding values for lower accuracy mid-infrared biomarkers increases their usefulness in genetic evaluation of dairy cattle". Conference abstract for conference
• Bolvig, A. K., Nørskov, N., Hedemann, M. S., et al., 2.6.2017, "The effect of antibiotics and diet on enterolactone concentration and metabolome studied by targeted and non-targeted LC-MS metabolomics", Journal of Proteome Research. Journal article